We’ve only been studying genome organization for a few years, and our first papers are starting to emerge... Stay tuned for more! This year will be an exciting year for us!
Genome organization
CAMPBELL, A. E., MARTINEZ, S. R. & MIRANDA, J. L. (2010) Molecular architecture of CTCFL. Biochem Biophys Res Commun, 396, 648-650.

MARTINEZ, S. R. & MIRANDA, J. L. (2010) CTCF terminal segments are unstructured. Protein Sci, 19, 1110-6.
Molecular structure-function
MIRANDA, J. J., KING, D. S. & HARRISON, S. C. (2007) Protein arms in the kinetochore-microtubule interface of the yeast DASH complex. Mol Biol Cell, 18, 2503-10.

MIRANDA, J. L. (2006) Conservation and diversity of ancient hemoglobins in Bacteria. Biochem Biophys Res Commun, 343, 924-7.

MIRANDA, J. J., MAILLETT, D. H., SOMAN, J. & OLSON, J. S. (2005) Thermoglobin, oxygen-avid hemoglobin in a bacterial hyperthermophile. J Biol Chem, 280, 36754-61.

MIRANDA, J. J., DE WULF, P., SORGER, P. K. & HARRISON, S. C. (2005) The yeast DASH complex forms closed rings on microtubules. Nat Struct Mol Biol, 12, 138-43.

MIRANDA, J. J. (2003) Position-dependent interactions between cysteine residues and the helix dipole. Protein Sci, 12, 73-81.

WILLIAMS, K. E., CARVER, T. A., MIRANDA, J. J., KAUTIAINEN, A., VOGEL, J. S., DINGLEY, K., BALDWIN, M. A., TURTELTAUB, K. W. & BURLINGAME, A. L. (2002) Attomole detection of in vivo protein targets of benzene in mice: evidence for a highly reactive metabolite. Mol Cell Proteomics, 1, 885-95.

ZIEGLER, M., MIRANDA, J. J., ANDERSEN, U. N., JOHNSON, D. W., LEARY, J. A. & RAYMOND, K. N. (2001) Combinatorial Libraries of Metal-Ligand Assemblies with an Encapsulated Guest Molecule. Angew Chem Int Ed Engl, 40, 733-6.

MIRANDA, J. J. (2000) Highly reactive cysteine residues in rodent hemoglobins. Biochem Biophys Res Commun, 275, 517-23.

YU, Z., FRISO, G., MIRANDA, J. J., PATEL, M. J., LO-TSENG, T., MOORE, E. G. & BURLINGAME, A. L. (1997) Structural characterization of human hemoglobin crosslinked by bis(3,5-dibromosalicyl) fumarate using mass spectrometric techniques. Protein Sci, 6, 2568-77.