UCSF home page UCSF home page About UCSF Search UCSF UCSF Medical Center
We’ve only been studying genome organization for a few years, and our first papers are starting to emerge... Stay tuned for more! This year will be an exciting year for us!

Genome organization


pdficon_large CAMPBELL, A. E., MARTINEZ, S. R. & MIRANDA, J. L. (2010) Molecular architecture of CTCFL. Biochem Biophys Res Commun, 396, 648-650.
pdficon_large MARTINEZ, S. R. & MIRANDA, J. L. (2010) CTCF terminal segments are unstructured. Protein Sci, 19, 1110-6.

Molecular structure-function

pdficon_large MIRANDA, J. J., KING, D. S. & HARRISON, S. C. (2007) Protein arms in the kinetochore-microtubule interface of the yeast DASH complex. Mol Biol Cell, 18, 2503-10.
pdficon_large MIRANDA, J. L. (2006) Conservation and diversity of ancient hemoglobins in Bacteria. Biochem Biophys Res Commun, 343, 924-7.
pdficon_large MIRANDA, J. J., MAILLETT, D. H., SOMAN, J. & OLSON, J. S. (2005) Thermoglobin, oxygen-avid hemoglobin in a bacterial hyperthermophile. J Biol Chem, 280, 36754-61.
nsmb_feb_2005_largecover
pdficon_large MIRANDA, J. J., DE WULF, P., SORGER, P. K. & HARRISON, S. C. (2005) The yeast DASH complex forms closed rings on microtubules. Nat Struct Mol Biol, 12, 138-43.
pdficon_large MIRANDA, J. J. (2003) Position-dependent interactions between cysteine residues and the helix dipole. Protein Sci, 12, 73-81.
pdficon_large WILLIAMS, K. E., CARVER, T. A., MIRANDA, J. J., KAUTIAINEN, A., VOGEL, J. S., DINGLEY, K., BALDWIN, M. A., TURTELTAUB, K. W. & BURLINGAME, A. L. (2002) Attomole detection of in vivo protein targets of benzene in mice: evidence for a highly reactive metabolite. Mol Cell Proteomics, 1, 885-95.
pdficon_large ZIEGLER, M., MIRANDA, J. J., ANDERSEN, U. N., JOHNSON, D. W., LEARY, J. A. & RAYMOND, K. N. (2001) Combinatorial Libraries of Metal-Ligand Assemblies with an Encapsulated Guest Molecule. Angew Chem Int Ed Engl, 40, 733-6.
pdficon_large MIRANDA, J. J. (2000) Highly reactive cysteine residues in rodent hemoglobins. Biochem Biophys Res Commun, 275, 517-23.
pdficon_large YU, Z., FRISO, G., MIRANDA, J. J., PATEL, M. J., LO-TSENG, T., MOORE, E. G. & BURLINGAME, A. L. (1997) Structural characterization of human hemoglobin crosslinked by bis(3,5-dibromosalicyl) fumarate using mass spectrometric techniques. Protein Sci, 6, 2568-77.